omnipy.components

Serializer registry helpers for Omnipy component packages.

MODULE	DESCRIPTION
general	General-purpose component package.
isa	ISA-Tab component package providing Investigation, Study, and Assay
json	JSON serialization component package.
nested	Nested data component package.
pandas	Pandas integration component package.
prefect	Prefect workflow engine component package.
raw	Raw data component package.
remote	Remote data access component package.
tables	Tabular data component package.

FUNCTION	DESCRIPTION
get_serializer_registry	Return the active serializer registry, creating it on demand if needed.
register_serializers	Register the built-in component serializers with a registry.

get_serializer_registry

get_serializer_registry()

Return the active serializer registry, creating it on demand if needed.

Source code in src/omnipy/components/__init__.py

def get_serializer_registry():
    """Return the active serializer registry, creating it on demand if needed."""

    from omnipy.data.serializer import SerializerRegistry
    from omnipy.hub.runtime import runtime

    serializer_registry = SerializerRegistry() if runtime is None else \
        runtime.objects.serializers
    if len(serializer_registry.serializers) == 0:
        register_serializers(serializer_registry)
    return serializer_registry

register_serializers

register_serializers(registry: IsSerializerRegistry)

Register the built-in component serializers with a registry.

Source code in src/omnipy/components/__init__.py

def register_serializers(registry: IsSerializerRegistry):
    """Register the built-in component serializers with a registry."""

    from .json.serializers import JsonDatasetToTarFileSerializer
    from .pandas.serializers import PandasDatasetToTarFileSerializer
    from .raw.serializers import (RawBytesDatasetToTarFileSerializer,
                                  RawStrDatasetToTarFileSerializer)

    registry.register(RawStrDatasetToTarFileSerializer)
    registry.register(RawBytesDatasetToTarFileSerializer)
    registry.register(JsonDatasetToTarFileSerializer)
    registry.register(PandasDatasetToTarFileSerializer)